Remus T. Dame: search on Z-Library

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1

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) ||

Year:

2018

Language:

english

File:

PDF, 14.65 MB

english, 2018

2

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Genomic SELEX Screening of Regulatory Targets of Escherichia coli Transcription Factors

Year:

2018

Language:

english

File:

PDF, 940 KB

english, 2018

3

Resolving the Kinetic States of a Proofreading DNA Polymerase

Lin, Szu-Ning, Cabanas Danes, Jordi, Hoekstra, Tjalle P., Kamsma, Douwe, Sitters, Gerrit, Depken, Martin, Dame, Remus T., Wuite, Gijs

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 44 KB

english, 2015

4

Vizualizing the Mechanism of H-NS Gene Regulation

Chaurasiya, Kathy R., van der Valk, Ramon, Henneman, Bram, Dame, Remus T.

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 41 KB

english, 2018

5

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Quantitative Determination of DNA Bridging Efficiency of Chromatin Proteins

Year:

2018

Language:

english

File:

PDF, 400 KB

english, 2018

6

Chromosomal Macrodomains and Associated Proteins: Implications for DNA Organization and Replication in Gram Negative Bacteria

Dame, Remus T., Kalmykowa, Olga J., Grainger, David C., Burkholder, William F.

Journal:

Year:

2011

Language:

english

File:

PDF, 459 KB

english, 2011

7

Structure and Function of Archaeal Histones

Henneman, Bram, Van Emmerik, Clara, Brouwer, Thomas, Van der Valk, Ramon A., Kirolos, Nancy, Van Ingen, Hugo, Van Noort, John, Dame, Remus T.

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 44 KB

english, 2018

8

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Processing and Analysis of Hi-C Data on Bacteria

Year:

2018

Language:

english

File:

PDF, 874 KB

english, 2018

9

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Quantitation of DNA-Binding Affinity Using Tethered Particle Motion

Year:

2018

Language:

english

File:

PDF, 530 KB

english, 2018

10

A physical approach to segregation and folding of the Caulobacter crescentus genome

Remus T. Dame, Mariliis Tark-Dame, Helmut Schiessel

Journal:

Molecular Microbiology

Year:

2011

Language:

english

File:

PDF, 79 KB

english, 2011

11

How Does the Replication Machinery Deal with Roadblocks: A Single-Molecule Investigation

Monachino, Enrico, van der Valk, Ramon A., Jergic, Slobodan, Dixon, Nicholas E., Dame, Remus Th, van Oijen, Antoine M.

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 43 KB

english, 2015

12

Structural basis for preferential binding of H-NS to curved DNA

Remus Thei Dame, Claire Wyman, Nora Goosen

Journal:

Year:

2001

Language:

english

File:

PDF, 73 KB

english, 2001

13

Probing the Unbinding Kinetics of DNA-H-NS-DNA Protein Complexes by a High-Speed and High-Throughput Single-Molecule Pulling Assay using Atomic Force Microscopy

Liang, Yan, Baclayon, Marian, van der Valk, Ramon, Th Dame, Remus, Roos, Wouter H., Wuite, Gijs J.L.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 44 KB

english, 2014

14

Nucleoid-associated proteins in Crenarchaea

Driessen, Rosalie P.C., Dame, Remus Th.

Journal:

Biochemical Society Transactions

Year:

2011

Language:

english

File:

PDF, 392 KB

english, 2011

15

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Determination of the 3D Genome Organization of Bacteria Using Hi-C

Year:

2018

Language:

english

File:

PDF, 622 KB

english, 2018

16

Bacterial Chromatin || Transcriptional Regulation by Nucleoid-Associated Proteins at Complex Promoters in Escherichia coli

Dame, Remus T., Dorman, Charles J.

Year:

2010

Language:

english

File:

PDF, 1.43 MB

english, 2010

17

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Molecular Dynamics Simulation of a Feather-Boa Model of a Bacterial Chromosome

Year:

2018

File:

PDF, 356 KB

2018

18

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Imaging of Transcription and Replication in the Bacterial Chromosome with Multicolor Three-Dimensional Superresolution Structured Illumination Microscopy

Year:

2018

Language:

english

File:

PDF, 315 KB

english, 2018

19

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || GeF-seq: A Simple Procedure for Base Pair Resolution ChIP-seq

Year:

2018

Language:

english

File:

PDF, 487 KB

english, 2018

20

The role of nucleoid-associated proteins in the organization and compaction of bacterial chromatin

Journal:

Molecular Microbiology

Year:

2005

Language:

english

File:

PDF, 260 KB

english, 2005

21

Bacterial chromatin: converging views at different scales

Dame, Remus T, Tark-Dame, Mariliis

Journal:

Current Opinion in Cell Biology

Year:

2016

Language:

english

File:

PDF, 1.82 MB

english, 2016

22

Single-molecule micromanipulation studies of DNA and architectural proteins

Dame, Remus Th.

Journal:

Biochemical Society Transactions

Year:

2008

Language:

english

File:

PDF, 262 KB

english, 2008

23

Bacterial Chromatin Volume 1096 || The Topology and Organization of Eukaryotic Chromatin

Dame, Remus T., Dorman, Charles J.

Year:

2010

Language:

english

File:

PDF, 848 KB

english, 2010

24

HU: promoting or counteracting DNA compaction?

Remus Thei Dame, Nora Goosen

Journal:

Year:

2002

Language:

english

File:

PDF, 254 KB

english, 2002

25

Probing the mechanical stability of bridged DNA-H-NS protein complexes by single-molecule AFM pulling

Liang, Yan, van der Valk, Ramon A., Dame, Remus T., Roos, Wouter H., Wuite, Gijs J. L.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.97 MB

english, 2017

26

The Interplay between a Bacterial Chromatin Protein and DNA Polymerase

Lin, Szu-Ning, Dame, Remus T., Wuite, Gijs J.L.

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 41 KB

english, 2017

27

Structure and function of archaeal histones

Henneman, Bram, van Emmerik, Clara, van Ingen, Hugo, Dame, Remus T., Levin, Petra Anne

Journal:

Year:

2018

Language:

english

File:

PDF, 11.51 MB

english, 2018

28

Post-translational modification of nucleoid-associated proteins: an extra layer of functional modulation in bacteria?

Dilweg, Ivar W., Dame, Remus T.

Journal:

Biochemical Society Transactions

Year:

2018

Language:

english

File:

PDF, 9.23 MB

english, 2018

29

Archaeal DNA Organization: The Mechanism of Alba I & II Revealed

Laurens, Niels, Vorselen, Daan, Driessen, Rosalie P.C., Noom, Maarten C., Hol, Felix J.H., White, Malcolm F., Dame, Remus T., Wuite, Gijs J.L.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 35 KB

english, 2011

30

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Microscale Thermophoresis Analysis of Chromatin Interactions

Year:

2018

Language:

english

File:

PDF, 778 KB

english, 2018

31

The Bacterial Chromatin Protein HupA Can Remodel DNA and Associates with the Nucleoid in Clostridium difficile

Oliveira Paiva, Ana M., Friggen, Annemieke H., Qin, Liang, Douwes, Roxanne, Dame, Remus T., Smits, Wiep Klaas

Journal:

Journal of Molecular Biology

Year:

2019

Language:

english

File:

PDF, 7.85 MB

english, 2019

32

Effect of Different Crowding Agents on the Architectural Properties of the Bacterial Nucleoid-Associated Protein HU

Lin, Szu-Ning, Wuite, Gijs J.L., Dame, Remus T.

Journal:

International Journal of Molecular Sciences

Year:

2020

File:

PDF, 5.55 MB

2020

33

Bacterial Chromatin || Dps and Bacterial Chromatin

Dame, Remus T., Dorman, Charles J.

Year:

2010

Language:

english

File:

PDF, 839 KB

english, 2010

34

Alba shapes the archaeal genome using a delicate balance of bridging and stiffening the DNA

Laurens, Niels, Driessen, Rosalie P.C., Heller, Iddo, Vorselen, Daan, Noom, Maarten C., Hol, Felix J.H., White, Malcolm F., Dame, Remus T., Wuite, Gijs J.L.

Journal:

Nature Communications

Year:

2012

Language:

english

File:

PDF, 1.61 MB

english, 2012

35

The organization of bacterial genomes: Towards understanding the interplay between structure and function

Brocken, Daan J.W., Tark-Dame, Mariliis, Dame, Remus T.

Journal:

Current Opinion in Systems Biology

Year:

2018

Language:

english

File:

PDF, 663 KB

english, 2018

36

The archaellum: a rotating type IV pilus

Shahapure, Rajesh, Driessen, Rosalie P.C., Haurat, M. Florencia, Albers, Sonja-Verena, Dame, Remus Th.

Journal:

Molecular Microbiology

Year:

2014

Language:

english

File:

PDF, 937 KB

english, 2014

37

Protein mediated bridging motifs: A key mechanism in biopolymer organization

Wiggins, Paul A., Dame, Remus Th, Noom, Maarten C., Wuite, Gijs J.L.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 38 KB

english, 2009

38

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || GeF-seq: A Simple Procedure for Base Pair Resolution ChIP-seq

Year:

2018

File:

PDF, 487 KB

2018

39

Changing patterns of international competition

Wiggins, Paul A., Dame, Remus Th, Noom, Maarten C., Wuite, Gijs J.L.

Journal:

Journal of Product Innovation Management

Year:

1986

Language:

english

File:

PDF, 115 KB

english, 1986

40

The interplay between nucleoid organization and transcription in archaeal genomes

Peeters, Eveline, Driessen, Rosalie P. C., Werner, Finn, Dame, Remus T.

Journal:

Nature Reviews Microbiology

Year:

2015

Language:

english

File:

PDF, 421 KB

english, 2015

41

E. coli Fis Protein Insulates the cbpA Gene from Uncontrolled Transcription

Chintakayala, Kiran, Singh, Shivani S., Rossiter, Amanda E., Shahapure, Rajesh, Dame, Remus T., Grainger, David C., Burkholder, William F.

Journal:

Year:

2013

Language:

english

File:

PDF, 835 KB

english, 2013

42

The architectural role of nucleoid-associated proteins in the organization of bacterial chromatin: A molecular perspective

Martijn S. Luijsterburg, Maarten C. Noom, Gijs J.L. Wuite, Remus Th. Dame

Journal:

Journal of Structural Biology

Year:

2006

Language:

english

File:

PDF, 1.09 MB

english, 2006

43

Investigating the Interaction of Single UvrA Dimers with DNA Using a Combination of Fluorescent Microscopy and Optical Tweezers

Biebricher, Andreas, Wagner, Koen, Moolenaar, Geri F., Goosen, Nora, Dame, Remus T., Peterman, Erwin J.G., Wuite, Gijs J.L.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 41 KB

english, 2011

44

The Major Architects of Chromatin: Architectural Proteins in Bacteria, Archaea and Eukaryotes

Luijsterburg, Martijn S., White, Malcolm F., van Driel, Roel, Dame, Remus Th.

Journal:

Critical Reviews in Biochemistry and Molecular Biology

Year:

2008

Language:

english

File:

PDF, 651 KB

english, 2008

45

Bacterial Chromatin || H-NS as a Defence System

Dame, Remus T., Dorman, Charles J.

Year:

2010

Language:

english

File:

PDF, 1.48 MB

english, 2010

46

Bacterial Chromatin || Nucleoid-Associated Proteins: Structural Properties

Dame, Remus T., Dorman, Charles J.

Year:

2010

Language:

english

File:

PDF, 1.45 MB

english, 2010

47

H-NS promotes looped domain formation in the bacterial chromosome

Maarten C. Noom, William W. Navarre, Taku Oshima, Gijs J.L. Wuite, Remus T. Dame

Journal:

Current Biology

Year:

2007

Language:

english

File:

PDF, 146 KB

english, 2007

48

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Observing Bacterial Chromatin Protein-DNA Interactions by Combining DNA Flow-Stretching with Single-Molecule Imaging

Year:

2018

Language:

english

File:

PDF, 476 KB

english, 2018

49

Effect of Temperature on the Intrinsic Flexibility of DNA and Its Interaction with Architectural Proteins

Driessen, Rosalie P. C., Sitters, Gerrit, Laurens, Niels, Moolenaar, Geri F., Wuite, Gijs J. L., Goosen, Nora, Dame, Remus Th.

Journal:

Year:

2014

Language:

english

File:

PDF, 789 KB

english, 2014

50

[Methods in Molecular Biology] Bacterial Chromatin Volume 1837 (Methods and Protocols) || Deciphering 3D Organization of Chromosomes Using Hi-C Data

Year:

2018

Language:

english

File:

PDF, 665 KB

english, 2018

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